A new reality and an alternative reality are shaping up in Egypt. President Mohamed Morsi and the Muslim Brotherhood appear firmly in control. Morsi seized on the killing of 16 Egyptian soldiers in the Sinai early this month — an embarrassment for the military and particularly the Supreme Council of the Armed Forces (SCAF) — to remove the most senior military leaders from office. He also unilaterally amended the March 2011 constitution declaration and gave his office executive and legislative powers. In short, with no hint of resistance from the military, Morsi has imposed civilian leadership on Egypt.

Many see Morsi's move to control SCAF — he sacked Field Marshal Mohammed Hussein Tantawi; military chief of staff Sami Anan; and the heads of Egypt's army, navy and air force — as finally giving Egypt's revolution the chance to remove key remnants of the Mubarak regime and fulfill its promise. Others, particularly non-Islamists, are more prone to see recent actions as the Muslim Brotherhood removing any checks on its power.

Given some of the other moves that Morsi and those around him have made, there is reason to be concerned. Morsi has appointed a new minister of information, Salah Abdul Maqsud; he, too, comes from the Muslim Brotherhood and actively supports the move to replace 50 leading editors and journalists. Charges have been filed against the editor of the independent opposition newspaper al-Dustour for insulting the president. It is probably no accident that the state media's tone changed markedly last week — and is far more favorable toward Morsi.